$Id: README 12697 2009-12-26 16:39:09Z AxelBrandenburg $ 1. You are not supposed to compile in this src directory. 2. You should always compile from the run directory (e.g. creacted via pc_newrun by cloning an earlier run). This src directory appears then as a link in you run directory. The cr_setupsrc produces a file Makefile in your run directory. 3. The file src/Makefile.local indicates which files are actually used. In fact, only a small fraction is used each time. 4. Example: the equation-of-state module. In Pencil you would only used one out of several possibilities: eos_idealgas.f90 eos_chemistry.f90 eos_ionization.f90 eos_fixed_ionization.f90 eos_temperature_ionization.f90 and runs without an equation of state you would use: noeos.f90 5. Some confusion may occur because not all modules are equally frequently used, and some are more outdated and not recommended. The following gives a brief status decription.